Boutique Hotels in Tokyo, Tokyo Prefecture

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Our top choices for Tokyo boutique hotels

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The Gate Hotel Kaminarimon by Hulic

The Gate Hotel Kaminarimon by Hulic

4.0 star property
Taito
9.4 out of 10, Exceptional, (1010)
"Very convenient location, rooms are very spacious as well!"
Singapore
Priscilla
The price is P6,804
P8,233 total
Jan 4 - Jan 5, 2026
The Gate Hotel Kaminarimon by Hulic
Executive lounge
Hotel Chinzanso Tokyo

Hotel Chinzanso Tokyo

5.0 star property
Bunkyo
9.8 out of 10, Exceptional, (1071)
"We had an extra ordinary staying, we were enjoyed so much, Tnx"
United States
Efraim
Hotel Chinzanso Tokyo
Spa
The Tokyo Station Hotel

The Tokyo Station Hotel

4.5 star property
Chiyoda
9.8 out of 10, Exceptional, (1004)
"Outstanding hotel in a perfect location - at the main station, and right near the Imperial Palace."
Australia
Alastair
The price is P22,882
P28,946 total
Jan 4 - Jan 5, 2026
The Tokyo Station Hotel
Front of property
Solaria Nishitetsu Hotel Ginza

Solaria Nishitetsu Hotel Ginza

3.5 star property
Ginza
9.0 out of 10, Wonderful, (1005)
"Excellent hotel"
United States
Rodney
The price is P9,803
P10,783 total
Jan 5 - Jan 6, 2026
Solaria Nishitetsu Hotel Ginza
1 bedroom, down comforters, minibar, in-room safe
The Capitol Hotel Tokyu

The Capitol Hotel Tokyu

5.0 star property
Chiyoda
9.8 out of 10, Exceptional, (1000)
"Exceptional Great hotel, great staff and fantastic location "
Canada
Sherif
The price is P25,257
P31,950 total
Jan 8 - Jan 9, 2026
The Capitol Hotel Tokyu
Lunch and dinner served
The Peninsula Tokyo

The Peninsula Tokyo

5.0 star property
Chiyoda
9.4 out of 10, Exceptional, (1001)
"Clean room, comfortable bed and nice staff."
United States
Richard
The price is P39,348
P49,927 total
Jan 4 - Jan 5, 2026
The Peninsula Tokyo
Executive lounge
Palace Hotel Tokyo

Palace Hotel Tokyo

5.0 star property
Chiyoda
9.8 out of 10, Exceptional, (1002)
"Staff was excellent, property and views are beautiful and serene in the middle of Tokyo, Highly recommended. "
United States
Elaine
The price is P35,413
P44,798 total
Jan 4 - Jan 5, 2026
Palace Hotel Tokyo
Exterior
Shangri-La Tokyo

Shangri-La Tokyo

5.0 star property
Chiyoda
9.6 out of 10, Exceptional, (597)
"really nice location and great service"
United States
xue
The price is P34,051
P43,226 total
Jan 6 - Jan 7, 2026
Shangri-La Tokyo
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
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Top Tokyo Hotel Reviews

Shinagawa Prince Hotel

Shinagawa Prince Hotel

10/10 Excellent
"Great hotel , with a really nice Onsen, and no tattoos allowed , which I really appreciated, dont change! and great breakfast and location, all in all an incredible value for the cost."
Lavi 1-night trip
Posted 1 day ago
Shinagawa Prince Hotel
Shinjuku Granbell Hotel

Shinjuku Granbell Hotel

10/10 Excellent
"Very clean. Rooms were small but well laid out and comfortable. Loved the warm toilet seat and bath tub."
Reid 2-night trip
Posted 2 days ago
Shinjuku Granbell Hotel

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Frequently asked questions

Searching for a stylish place to stay when you visit Tokyo?
If you want to find a small hotel with terrific service, a personal feel, and great ambiance, a boutique hotel may be exactly what you want. Select from 9 boutique accommodations in Tokyo to find a property that represents the local feel of this area.
What's the best boutique accommodation in Tokyo?
The Capitol Hotel Tokyu is a favorite hotel with Expedia travelers looking for a stylish stay, and features 3 restaurants and 2 bars. Hotel Chinzanso Tokyo and The Peninsula Tokyo are a couple of other boutique hotels.
How many boutique hotels can I expect to find in Tokyo?
Expedia has 9 boutique hotels in Tokyo.
What's there to see and do in Tokyo?
Visitors speak positively about this destination's major shopping centers, temples, and top museums. While you're out and about in Tokyo, popular attractions like Tokyo Tower, Tokyo Dome, and Tokyo Skytree are worth a visit. You might also want to see noteworthy spots like Tokyo Disneyland®, Tokyo DisneySea®, and Tokyo Imperial Palace during your trip.
What kind of weather should I plan for when I travel to Tokyo?
Having a good idea of the weather in Tokyo will help you enjoy your stay to the fullest. The hottest months are usually August and July with an average temp of 77°F, while the coldest months are January and February with an average of 46°F. The rainiest months in Tokyo are October, September, June, and July, with each month seeing an average of 7 inches of rainfall.
What's the best way to get to my boutique hotel in Tokyo?
You have a few options for transportation to and around Tokyo. The nearest major airport is Haneda Airport (HND), which is located 8.8 mi (14.1 km) away, but Narita Intl. Airport (NRT) may also be an option. You can take advantage of metro transit at Hibiya Station, Ginza Station, and Ginza-Itchome Station.