Boutique Hotels in Shinjuku, Tokyo

  • Change your mind

    Book hotels with free cancellation
  • Treat yourself

    Sign in to save 10% or more on thousands of hotels
  • Be picky

    Search almost a million properties worldwide

Check availability on Shinjuku Boutique Hotels

Our top choices for Shinjuku boutique hotels

Hotel Chinzanso Tokyo

Hotel Chinzanso Tokyo
5.0 star property
Bunkyo
9.8 out of 10, Exceptional, (1,076 reviews)
"Lovely stay!"
Australia
Matthew
Hotel Chinzanso Tokyo

Palace Hotel Tokyo

Palace Hotel Tokyo
5.0 star property
Chiyoda
9.8 out of 10, Exceptional, (1,001 reviews)
"had a wonderful stay kind staff and great hospitality love the hotel room and location i recommend this hotel"
United States
dhuha
The price is P43,498
P55,025 total
Mar 4 - Mar 5
Palace Hotel Tokyo

The Capitol Hotel Tokyu

The Capitol Hotel Tokyu
5.0 star property
Chiyoda
9.8 out of 10, Exceptional, (1,000 reviews)
"I loved my stay. It felt like an authentic Japanese experience. The highlight was the breakfast breakfast. The hotel is very clean and i loved the location. I would stay again."
United States
ANDREA
The price is P30,063
P38,030 total
Feb 24 - Feb 25
The Capitol Hotel Tokyu

The Peninsula Tokyo

The Peninsula Tokyo
5.0 star property
Chiyoda
9.4 out of 10, Exceptional, (1,001 reviews)
"Amazing all round. Totally worth it."
Canada
Dori-ann
The price is P42,290
P53,647 total
Feb 24 - Feb 25
The Peninsula Tokyo

The Tokyo Station Hotel

The Tokyo Station Hotel
4.5 star property
Chiyoda
9.8 out of 10, Exceptional, (1,002 reviews)
"Great rooms service and location. "
United States
Yuzo
The price is P21,749
P27,512 total
Feb 23 - Feb 24
The Tokyo Station Hotel

Shangri-La Tokyo

Shangri-La Tokyo
5.0 star property
Chiyoda
9.6 out of 10, Exceptional, (604 reviews)
"Excellent location service is best ever Amazing facility and they let us do a late check out that was so helpful!!!"
United States
Margo
The price is P48,709
P61,767 total
Mar 8 - Mar 9
Shangri-La Tokyo

Solaria Nishitetsu Hotel Ginza

Solaria Nishitetsu Hotel Ginza
3.5 star property
Ginza
9.0 out of 10, Wonderful, (1,006 reviews)
"Good stay, room a little small, very helpful staff especially with luggage forwarding. "
Australia
Joyce
The price is P14,022
P15,424 total
Feb 20 - Feb 21
Solaria Nishitetsu Hotel Ginza

The Gate Hotel Kaminarimon by Hulic

The Gate Hotel Kaminarimon by Hulic
4.0 star property
Taito
9.4 out of 10, Exceptional, (1,009 reviews)
"Staff were amazing! A perfect location too! "
Canada
Sandy
The price is P9,515
P11,513 total
Mar 8 - Mar 9
The Gate Hotel Kaminarimon by Hulic
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Top Shinjuku Hotel Reviews

Frequently asked questions

What's there to see and do in Shinjuku?
The bars, shopping, and sightseeing are just some of the things to enjoy while you're in the area. Top activities and sights around Shinjuku include Shibuya Crossing, Tokyo Dome, and Tokyo Tower. You might also want to see interesting spots such as Tokyo Skytree, Tokyo Disneyland®, and Tokyo DisneySea® during your trip.
What's the best way to get to my boutique hotel in Shinjuku?
You have a few options for getting to and around Shinjuku. The closest major airport is Haneda Airport (HND), which is located 11 mi (17.7 km) away. You can walk to nearby metro stations including Shinjuku-sanchome Station, Shinjuku-nishiguchi Station, and Higashi-shinjuku Station.