Top 10 Hotels Near San Diego Botanic Garden in Encinitas for 2026

A garden with a pond, palm trees, and a building with arches.

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Our top choices for San Diego Botanic Garden hotels

A beach with palm trees, a lifeguard tower, and a sandy walkway.

A hotel room with two beds, a nightstand with a lamp, an air conditioning unit, and a window with a view.

A kitchen with a door leading outside, a clock on the wall, and a framed picture of a delivery truck.

1. Moonlight Beach Motel

Downtown Encinitas, 1.5 km from San Diego Botanic Garden

Scott

P9,657

P10,623 total

includes taxes & fees

Oct 14 - Oct 15

A hammock in a room with wooden flooring and a dark wall.

A modern two-story building with a wooden facade, a garage, and a well-maintained garden with various plants and flowers.

A modern living room with a fireplace, wooden ceiling beams, a sofa, and a dining area with checkered chairs.

A woman sitting in a teal hanging chair on a wooden deck with a view of trees and a building in the background.

2. Twelve Senses Retreat

1.5 km from San Diego Botanic Garden

Jacklyn

P22,294

P24,649 total

includes taxes & fees

Oct 22 - Oct 23

A modern kitchen with a central island, pendant lighting, and a wall calendar.

A hallway with a circular window featuring a statue, surrounded by labeled columns and a wooden wall.

A modern living room with a wooden floor, a black leather sofa, a white table with chairs, and a wicker side table.

A wooden wall with planters labeled "SUCCULENT LIBRARY" containing various succulents.

3. Inn at Moonlight Beach

Downtown Encinitas, 1.2 km from San Diego Botanic Garden

Cesar

P22,813

P26,968 total

includes taxes & fees

Sep 30 - Oct 1

A swimming pool with a clear blue edge, a metal ladder, and a stone wall in the background.

A modern lounge area with patterned sofas, round tables, and a large window offering a view of the outdoors.

A spacious kitchen with wooden cabinets, a marble countertop, and a breakfast bar.

A reception desk with a wooden panel design and a digital kiosk, located in a modern hotel lobby with a large window and a welcome sign.

4. Hampton Inn Cardiff Beach Encinitas, CA Near Del Mar

2.9 km from San Diego Botanic Garden

April

P9,170

P10,087 total

includes taxes & fees

Oct 6 - Oct 7

A bedroom with a bed, a chair, and a window with a view of a parking lot and buildings.

An aerial view of a parking lot with a swimming pool, surrounded by greenery and shaded by umbrellas.

A hotel with a swimming pool, solar panels, and a parking lot.

A modern hotel lobby with a large window, a reception desk, a sofa, and a small table.

5. Brisa Pacific Hotel Encinitas

Downtown Encinitas, 1.7 km from San Diego Botanic Garden

Qiseana

P7,430

P8,173 total

includes taxes & fees

Oct 29 - Oct 30

A heated outdoor pool area with lounge chairs and umbrellas, surrounded by palm trees and a building with multiple balconies.

A hotel with a swimming pool, outdoor seating, and a covered area.

A multi-story hotel with balconies, a parking lot, and palm trees.

A hotel room with a large bed, a bench, a TV, and a dresser.

6. The Encinitan Hotel & Suites

Downtown Encinitas, 1.1 km from San Diego Botanic Garden

Antonio

P7,628

P9,343 total

includes taxes & fees

Sep 30 - Oct 1

A staircase with wooden railings leading to a beach, surrounded by palm trees and a clear sky.

A reception area with a painting of the ocean, a hand sanitizer dispenser, a coffee machine, and a digital scale.

A building with a white facade, a central entrance, and a covered walkway.

A bathroom with a blue vessel sink, a large mirror, and a towel rack.

7. Rodeway Inn Encinitas North

Leucadia, 3.2 km from San Diego Botanic Garden

Lyndsay

P4,456

P5,215 total

includes taxes & fees

Oct 5 - Oct 6

A modern hotel room with two beds, a desk, a TV, and a cityscape view.

A rocky beach with waves crashing onto the shore and a cliff in the background.

A hotel room with a sofa, a wooden table, a mirror, a lamp, and a framed picture on the wall.

8. Days Inn by Wyndham Encinitas Moonlight Beach

Downtown Encinitas, 1 km from San Diego Botanic Garden

Helli

P6,185

P6,834 total

includes taxes & fees

Sep 30 - Oct 1

A hotel room with a bed, a desk with a chair, a bench, a TV, a mirror, and a bathroom.

A multi-story hotel with a covered entrance, palm trees, and a parking area with marked spaces.

A pool area with lounge chairs and a staircase leading to the upper floors.

A hotel room with a bed, a sofa, a small table, a lamp, a picture on the wall, and a window with a view.

9. Comfort Inn Encinitas Near Legoland

Leucadia, 1.6 km from San Diego Botanic Garden

Marcella

P6,291

P6,932 total

includes taxes & fees

Oct 18 - Oct 19

An outdoor seating area with sofas, chairs, and tables, surrounded by a stone wall and string lights.

A hotel room with two beds, a desk with a computer, a chair, and a large window with a view of a landscape.

A spacious lobby with a reception desk, seating area, and a kitchen in the background.

A modern hotel lobby with a reception desk, seating area, and a fireplace.

10. Ayres Hotel Vista Carlsbad

10.3 km from San Diego Botanic Garden

Shannon J

P9,059

P9,982 total

includes taxes & fees

Oct 4 - Oct 5

A swimming pool with lounge chairs and a building with multiple windows and balconies.

A spacious living area with a sofa, dining tables, and a fireplace.

A hotel with a large entrance, a covered patio area, and a tower-like structure.

A spacious lobby with a wooden staircase, a reception desk, and a large rug.

11. West Inn & Suites

10.3 km from San Diego Botanic Garden

Juan

P7,403

P9,708 total

includes taxes & fees

Oct 18 - Oct 19

An aerial view of a beach with numerous umbrellas and people.

A modern bedroom with a bed, a desk, a chair, and a wardrobe.

A modern kitchen with white cabinetry, a large island with two barstools, and pendant lighting.

A corridor with a view of the ocean at sunset, potted plants, and a railing.

12. Del Mar Beach Hotel

10.1 km from San Diego Botanic Garden

Nicole

P14,479

P18,576 total

includes taxes & fees

Oct 4 - Oct 5

An outdoor patio with a grill, dining area, and seating.

A modern hotel lobby with a stone fireplace, a reception desk, and a blue seating area.

A pool area with lounge chairs, a pool, and a covered seating area.

A Fairfield Inn & Suites Marriott hotel with a modern design, featuring a prominent entrance and a well-lit facade.

13. Fairfield Inn & Suites San Diego North/San Marcos

14.4 km from San Diego Botanic Garden

Paula

P8,940

P9,852 total

includes taxes & fees

Oct 6 - Oct 7

A modern resort with a swimming pool, a covered outdoor area, and a sunset view.

A patio with outdoor seating, a fire pit, and a view of the surrounding landscape.

A gated entrance with a stone sign, a white car parked inside, and a well-maintained garden with red flowers.

A spacious dining area with a long table set for multiple guests, a fireplace, and a view of the outdoors.

14. Rancho Valencia Resort and Spa

11.2 km from San Diego Botanic Garden

Lilit

P68,660

P79,347 total

includes taxes & fees

Oct 4 - Oct 5

A swimming pool area with lounge chairs, umbrellas, and safety signs.

A modern hotel lobby with a large seating area, a central table, and large windows with curtains.

A hotel room with a large bed, two bedside tables, a chair, and a small table.

A hotel room with a wooden shelf unit, a door, and a wall with a circular pattern. There are two refrigerators with various food items and beverages.

15. Hampton Inn Carlsbad-North San Diego County

8.1 km from San Diego Botanic Garden

Jamie

P7,633

P8,641 total

includes taxes & fees

Oct 25 - Oct 26

An outdoor seating area with chairs and a fire feature, overlooking a body of water and a distant mountain range.

A spacious living area with a wooden table, a sofa, and a chair, overlooking a scenic view of a body of water and hills.

A wedding aisle with white chairs and floral decorations leading to a decorated arch.

A hotel room with a large bed, a TV, a desk with a lamp, and a view of a lake and mountains.

16. Lakehouse Resort

10.4 km from San Diego Botanic Garden

Kassandra

P7,253

P9,876 total

includes taxes & fees

Oct 5 - Oct 6

A buffet setup with coffee dispensers, coffee mugs, and food containers.

A hotel room with a large bed, a wooden headboard, a bedside table with a lamp, and a window with curtains.

A lobby with blue sofas, two armchairs, a coffee table, a chandelier, and a wall-mounted air conditioner.

A gym with cardio machines, a weight machine, and a TV on the wall.

17. Continental Inn San Diego Hotel Escondido

17.9 km from San Diego Botanic Garden

Warren

P8,405

P9,246 total

includes taxes & fees

Sep 30 - Oct 1

A brick pathway leading to a building with a covered entrance, surrounded by well-maintained gardens and trees.

A spacious living room with a herringbone wood floor, wooden ceiling beams, and a large painting on the wall.

A restaurant with a long wooden table, green upholstered seating, and a patterned ceiling.

A bar area with green upholstered bar stools, a marble countertop, and a fireplace.

18. Inn At Rancho Santa Fe

8 km from San Diego Botanic Garden

Robert

P21,310

P26,437 total

includes taxes & fees

Oct 14 - Oct 15

A resort with a large swimming pool, multiple buildings, and surrounding greenery.

A cozy lounge area with a fireplace, comfortable seating, and large windows offering a view of the outdoors.

A woman in a floral swimsuit stepping out of a spa area with a hot tub, a lounge chair, and a sign indicating an outdoor terrace.

A couple dining outdoors at a table with a fire feature, in front of a classical building with arches.

19. Fairmont Grand Del Mar

14.9 km from San Diego Botanic Garden

Brandon

P43,670

P55,255 total

includes taxes & fees

Oct 30 - Oct 31

A two-story building with a brown tiled roof, a stone chimney, and a flag.

An outdoor patio area with seating arrangements, umbrellas, and a stone wall with a fire feature.

A spacious living area with a kitchen counter, a sofa, and a coffee table.

20. Best Western Premier Hotel Del Mar

11.5 km from San Diego Botanic Garden

Debbie

P9,309

P10,537 total

includes taxes & fees

Sep 30 - Oct 1

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Compare popular hotels close to San Diego Botanic Garden

Property	Property class	Guest rating
Moonlight Beach Motel	9.6 Exceptional 646 reviews	View
Twelve Senses Retreat	9.8 Exceptional 43 reviews	View
Inn at Moonlight Beach	9.6 Exceptional 146 reviews	View
Hampton Inn Cardiff Beach Encinitas, CA Near Del Mar	9.2 Wonderful 1,059 reviews	View
Brisa Pacific Hotel Encinitas	8.8 Excellent 1,008 reviews	View

Top San Diego Botanic Garden Hotel Reviews

Brisa Pacific Hotel Encinitas

10/10 Excellent

"Place was good, dated, but great location."

Cape Rey Carlsbad Beach, a Hilton Resort & Spa

10/10 Excellent

"Balcony rooms have beautiful sunset views. Chandler restaurant doesn't have very good service but food is good."

La Quinta Inn & Suites by Wyndham Carlsbad - Legoland Area

8/10 Good

"Breakfast options were great! Visit served its purpose being so close to legoland. Would have preferred a room on the opposite side away from the freeway noise."

Hampton Inn Cardiff Beach Encinitas, CA Near Del Mar

8/10 Good

"The front desk was nice and recommended some nearby restaurants. The room was clean. There's not much lighting in the room. One of the side lamps next to the bed didn't work well. It was flickering off and on. So we didn't use it. Also the fan in the bathroom wouldn't stay off, so it was a constant noise. Breakfast was pretty good. They had great options and it was very clean. Plenty of parking. The hotel is next to the freeway. since I'm a light sleeper, motorcycles and loud vehicles would wake me up during the night. The person I traveled with didn't have that issue though. Overall. We would stay again. It's a near (10 min) to a lot of restaurants and shops."

Days Inn by Wyndham Encinitas Moonlight Beach

8/10 Good

"Revitalized rooms a big +"

Four Seasons Residence Club Aviara, North San Diego

10/10 Excellent

"Clean property in quiet location. Spa is closed on Sunday. Service is top notch and restaurant service was excellent"

Omni La Costa Resort & Spa Carlsbad

10/10 Excellent

"We had yet another great stay at the Omni La Costa! I do think they need to give the resort rooms a deep clean. This was the 3rd stay where it wasn't super clean with a bit mold in the shower. Not a deal breaker, but something to be aware of."

Leucadia Beach Inn

10/10 Excellent

"Very cozy and nice clean units with a great sized fridge"

Moonlight Beach Motel

10/10 Excellent

"The motel is very close to the beach 4 min walk and it has beach chairs and boogie boards available although, they are older and well used. My room was very clean had all the amenities I needed and they were very nice to have upgraded me. The staff and manager were super helpful. They have a barbecue area with a nice barbecue to use the water. Pressure could be better at least in my room, but the towels were soft and fluffy and plenty of them. The beds were extremely comfortable and I believe the room must be soundproof because I couldn’t hear anything and there is a train track nearby. I would highly recommend this motel as I have been here several times and I’ve never been disappointed."

Other attractions near San Diego Botanic Garden

A sunset over a pebble beach with the sun low on the horizon.

Moonlight State Beach

9.2/10 (544 reviews)

Why not spend a carefree afternoon at Moonlight State Beach during your travels in Encinitas? Discover the sunsets and seafood restaurants in this walkable area.

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A white building with a golden dome, surrounded by palm trees and a parking lot with cars.

Self Realization Fellowship

8.8/10 (75 reviews)

You can find out about the history of Encinitas with a visit to Self Realization Fellowship. Wander the beautiful beaches and seaside in this family-friendly area.

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Soul of Yoga

After visiting Soul of Yoga, make a plan to see the other sights and activities in Encinitas. While you're in the area, stroll along the beautiful beaches.

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Encinitas Surfboards

You can browse for the perfect souvenirs at Encinitas Surfboards during your visit to Encinitas.

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Scripps Memorial Hospital Encinitas

Scripps Memorial Hospital Encinitas is just one of the places to see in Encinitas, so why not enjoy the other things to explore during your travels?

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Encinitas Ranch Golf Course

7.6/10 (44 reviews)

Play a round of golf in Encinitas at Encinitas Ranch Golf Course, and enjoy other activities such as surfing. Wander the beautiful beaches or discover the beautiful sunsets in this family-friendly area.

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D Street Viewpoint

You can learn about the history of Encinitas with a stop at D Street Viewpoint.

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I Street Viewpoint

You can find out about the history of Encinitas when you stop by I Street Viewpoint.

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Frequently asked questions

What's the area like around San Diego Botanic Garden?

San Diego Botanic Garden is located in a family-friendly area of Encinitas known for its beautiful beaches and surfing. If you're looking for a convenient place to stay, check out the 72 hotels and other accommodations you'll find within a mile.

What's the best hotel to stay close to San Diego Botanic Garden?

The Encinitan Hotel & Suites is one of the top choices for your stay based on our traveler data, and this hotel offers free breakfast and an outdoor pool. It's located just a short 0.7 mi (1.1 km) from San Diego Botanic Garden. Other good choices close by include Days Inn by Wyndham Encinitas Moonlight Beach and Moonlight Beach Motel.

How many hotels should I expect to find close to San Diego Botanic Garden?

Expedia has 72 hotels and other accommodations within a mile from San Diego Botanic Garden.

If I need to cancel the hotel reservation for my stay near San Diego Botanic Garden, will I receive a refund?

Yes! Most room reservations are fully refundable as long as you cancel prior to the accommodation's cancellation deadline, which often is within 24-48 hours of your arrival date. If you have a non-refundable reservation, it might still be possible to cancel it and get a refund within a 24-hour period of booking. Add dates, click "Search", then use the filter option "fully refundable" to get the top deals on offer near San Diego Botanic Garden.

What can I see and do near San Diego Botanic Garden?

You can enjoy live performances at Belly Up and North Coast Repertory Theatre. Spend some time wandering around San Elijo State Beach, Encinitas Community Park, and Batiquitos Lagoon Foundation Nature Center. Moonlight State Beach, South Carlsbad State Beach, and Solana Beach are great spots if you want to spend some time by the water during your stay.

Hotels near San Diego Botanic Garden

Change your mind

Treat yourself

Be picky

Check prices for these dates

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Our top choices for San Diego Botanic Garden hotels

1. Moonlight Beach Motel

2. Twelve Senses Retreat

3. Inn at Moonlight Beach

4. Hampton Inn Cardiff Beach Encinitas, CA Near Del Mar

5. Brisa Pacific Hotel Encinitas

6. The Encinitan Hotel & Suites

7. Rodeway Inn Encinitas North

8. Days Inn by Wyndham Encinitas Moonlight Beach

9. Comfort Inn Encinitas Near Legoland

10. Ayres Hotel Vista Carlsbad

11. West Inn & Suites

12. Del Mar Beach Hotel

13. Fairfield Inn & Suites San Diego North/San Marcos

14. Rancho Valencia Resort and Spa

15. Hampton Inn Carlsbad-North San Diego County

16. Lakehouse Resort

17. Continental Inn San Diego Hotel Escondido

18. Inn At Rancho Santa Fe

19. Fairmont Grand Del Mar

20. Best Western Premier Hotel Del Mar

Compare popular hotels close to San Diego Botanic Garden

Top San Diego Botanic Garden Hotel Reviews

Brisa Pacific Hotel Encinitas

Cape Rey Carlsbad Beach, a Hilton Resort & Spa

La Quinta Inn & Suites by Wyndham Carlsbad - Legoland Area

Hampton Inn Cardiff Beach Encinitas, CA Near Del Mar

Days Inn by Wyndham Encinitas Moonlight Beach

Four Seasons Residence Club Aviara, North San Diego

Omni La Costa Resort & Spa Carlsbad

Leucadia Beach Inn

Moonlight Beach Motel

Other attractions near San Diego Botanic Garden

Moonlight State Beach

Self Realization Fellowship

Soul of Yoga

Encinitas Surfboards

Scripps Memorial Hospital Encinitas

Encinitas Ranch Golf Course

D Street Viewpoint

I Street Viewpoint

Frequently asked questions