Lincoln Hotels near San Rafael

Start date: Check-in selected.
To Date
End date: Check-out

  • Change your mind

    Book hotels with free cancellation

  • Treat yourself

    Sign in to save 10% or more on thousands of hotels
    Sign in

  • Be picky

    Search almost a million properties worldwide

Check prices for these dates

Tonight
Dec 30 - Dec 31
Tomorrow
Dec 31 - Jan 1
This weekend
Jan 2 - Jan 4
Next weekend
Jan 9 - Jan 11

Filter by

Guest rating
Guest rating
Star rating

Our top choices for Lincoln hotels

Desk, iron/ironing board, free cribs/infant beds, free WiFi
Marin Lodge

Marin Lodge

Marin Lodge
2.0 star property
Lincoln
9.6 out of 10, Exceptional, (1002)
"Great location "
United States
Gregg
The price is P6,412
P7,181 total
includes taxes & fees
Jan 5 - Jan 6, 2026
Marin Lodge
Italian cuisine
Villa Inn

Villa Inn

Villa Inn
2.0 star property
Lincoln
8.0 out of 10, Very Good, (1005)
"Yes Everyone was fantastic "
United States
Don
The price is P6,459
P7,234 total
includes taxes & fees
Dec 31 - Jan 1, 2026
Villa Inn
Terrace/patio
Club Quarters Hotel in San Francisco

Club Quarters Hotel in San Francisco

Club Quarters Hotel in San Francisco
4.0 star property
23.5 km from Lincoln
8.8 out of 10, Excellent, (2837)
"Clean room, friendly staff and good location"
United States
Jose Eduardo
The price is P5,953
P7,006 total
includes taxes & fees
Jan 2 - Jan 3, 2026
Club Quarters Hotel in San Francisco
Front of property - evening/night
Hilton San Francisco Financial District

Hilton San Francisco Financial District

Hilton San Francisco Financial District
4.0 star property
23.4 km from Lincoln
8.8 out of 10, Excellent, (2208)
"We loved our stay! "
United States
Christine
The price is P5,740
P6,756 total
includes taxes & fees
Jan 8 - Jan 9, 2026
Hilton San Francisco Financial District
Egyptian cotton sheets, premium bedding, down comforters, pillowtop beds
Hotel Caza Fisherman's Wharf

Hotel Caza Fisherman's Wharf

Hotel Caza Fisherman's Wharf
4.0 star property
21.7 km from Lincoln
9.0 out of 10, Wonderful, (3839)
"Excellent stay and great location! "
United States
CHRISTINE
The price is P7,146
P11,107 total
includes taxes & fees
Jan 30 - Jan 31, 2026
Hotel Caza Fisherman's Wharf
Exterior
DoubleTree by Hilton Hotel Berkeley Marina

DoubleTree by Hilton Hotel Berkeley Marina

DoubleTree by Hilton Hotel Berkeley Marina
4.0 star property
22.5 km from Lincoln
8.2 out of 10, Very Good, (4054)
"Clean rooms, great breakfast options & friendly staff"
United States
Beth
The price is P6,979
P8,040 total
includes taxes & fees
Jan 25 - Jan 26, 2026
DoubleTree by Hilton Hotel Berkeley Marina
Terrace/patio
Sonesta Emeryville - San Francisco Bay Bridge

Sonesta Emeryville - San Francisco Bay Bridge

Sonesta Emeryville - San Francisco Bay Bridge
3.0 star property
26.2 km from Lincoln
8.6 out of 10, Excellent, (1306)
"Convenient location, friendly staff"
United States
Diane
The price is P6,529
P7,985 total
includes taxes & fees
Jan 9 - Jan 10, 2026
Sonesta Emeryville - San Francisco Bay Bridge
Interior
Hotel Shattuck Plaza

Hotel Shattuck Plaza

Hotel Shattuck Plaza
4.0 star property
25.9 km from Lincoln
8.8 out of 10, Excellent, (1096)
"Wonderful, will stay here again."
United States
Jennifer
Hotel Shattuck Plaza
Terrace/patio
Hilton Garden Inn San Francisco/Oakland Bay Bridge

Hilton Garden Inn San Francisco/Oakland Bay Bridge

Hilton Garden Inn San Francisco/Oakland Bay Bridge
3.0 star property
25.6 km from Lincoln
8.8 out of 10, Excellent, (1151)
"Great staff and services provided."
United States
Charles
The price is P6,630
P7,438 total
includes taxes & fees
Jan 5 - Jan 6, 2026
Hilton Garden Inn San Francisco/Oakland Bay Bridge
Game room
Hotel Zephyr San Francisco

Hotel Zephyr San Francisco

Hotel Zephyr San Francisco
4.0 star property
21.8 km from Lincoln
8.6 out of 10, Excellent, (2342)
"Great location"
United States
Deborah
The price is P7,362
P10,742 total
includes taxes & fees
Jan 4 - Jan 5, 2026
Hotel Zephyr San Francisco
Exterior
HYATT house Emeryville/San Francisco Bay Area

HYATT house Emeryville/San Francisco Bay Area

HYATT house Emeryville/San Francisco Bay Area
3.0 star property
25.9 km from Lincoln
9.2 out of 10, Wonderful, (1193)
"We had a relaxing stay at the Hyatt House. We enjoy the friendly staff and location."
United States
Darius
The price is P8,471
P9,504 total
includes taxes & fees
Jan 6 - Jan 7, 2026
HYATT house Emeryville/San Francisco Bay Area
Exterior
InterContinental San Francisco by IHG

InterContinental San Francisco by IHG

InterContinental San Francisco by IHG
4.0 star property
24.7 km from Lincoln
9.2 out of 10, Wonderful, (1047)
"Pleasant stay"
United States
Yiwei
The price is P10,177
P14,401 total
includes taxes & fees
Jan 3 - Jan 4, 2026
InterContinental San Francisco by IHG
Outdoor pool, open 9:00 AM to 7:00 PM, sun loungers
Holiday Inn Golden Gateway by IHG

Holiday Inn Golden Gateway by IHG

Holiday Inn Golden Gateway by IHG
3.5 star property
23.2 km from Lincoln
9.0 out of 10, Wonderful, (5049)
"Nice stay. Hotel was clean, quiet and accessible. "
United States
Brandon
The price is P7,000
P8,239 total
includes taxes & fees
Jan 4 - Jan 5, 2026
Holiday Inn Golden Gateway by IHG
Lobby sitting area
Hotel Riu Plaza Fisherman's Wharf

Hotel Riu Plaza Fisherman's Wharf

Hotel Riu Plaza Fisherman's Wharf
4.0 star property
21.8 km from Lincoln
9.0 out of 10, Wonderful, (7255)
"Great place to stay!"
United States
Isaiah
The price is P5,863
P9,324 total
includes taxes & fees
Jan 5 - Jan 6, 2026
Hotel Riu Plaza Fisherman's Wharf
Interior entrance
Hotel Zoe Fisherman's Wharf

Hotel Zoe Fisherman's Wharf

Hotel Zoe Fisherman's Wharf
4.0 star property
21.8 km from Lincoln
9.2 out of 10, Wonderful, (1644)
"Great location, service, and rooms!"
United States
Joyce
The price is P6,829
P10,538 total
includes taxes & fees
Jan 3 - Jan 4, 2026
Hotel Zoe Fisherman's Wharf
3 outdoor pools, open 6:00 AM to 9:00 PM, pool umbrellas, sun loungers
Claremont Resort & Club

Claremont Resort & Club

Claremont Resort & Club
5.0 star property
28.5 km from Lincoln
8.8 out of 10, Excellent, (1010)
"Great hotel"
United States
Peter
The price is P13,333
P18,845 total
includes taxes & fees
Jan 1 - Jan 2, 2026
Claremont Resort & Club
Terrace/patio
Hyatt Centric Fisherman's Wharf San Francisco

Hyatt Centric Fisherman's Wharf San Francisco

Hyatt Centric Fisherman's Wharf San Francisco
4.0 star property
21.8 km from Lincoln
8.6 out of 10, Excellent, (1484)
"Wonderful Stay"
United States
Robert
The price is P7,931
P11,754 total
includes taxes & fees
Jan 30 - Jan 31, 2026
Hyatt Centric Fisherman's Wharf San Francisco
Front of property - evening/night
Hotel Nikko San Francisco

Hotel Nikko San Francisco

Hotel Nikko San Francisco
4.5 star property
24.1 km from Lincoln
9.4 out of 10, Exceptional, (2672)
"Great service, great location, great hotel. "
United States
Laura
The price is P8,950
P13,238 total
includes taxes & fees
Jan 23 - Jan 24, 2026
Hotel Nikko San Francisco
Lobby
Marriott Vacation Club®, San Francisco

Marriott Vacation Club®, San Francisco

Marriott Vacation Club®, San Francisco
3.0 star property
21.8 km from Lincoln
9.2 out of 10, Wonderful, (1119)
"Great hotel"
United States
Michelle
The price is P7,941
P9,346 total
includes taxes & fees
Jan 23 - Jan 24, 2026
Marriott Vacation Club®, San Francisco
Exterior
Hyatt Place San Francisco Downtown

Hyatt Place San Francisco Downtown

Hyatt Place San Francisco Downtown
3.0 star property
25.5 km from Lincoln
9.4 out of 10, Exceptional, (1903)
"Great hotel!"
United States
Michael
The price is P9,941
P11,700 total
includes taxes & fees
Jan 23 - Jan 24, 2026
Hyatt Place San Francisco Downtown
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
View all properties

Where to stay in Lincoln

Find the best Lincoln areas and neighborhoods for the activities you enjoy most.
Mission San Rafael Arcangel showing a church or cathedral, heritage architecture and religious aspects

Downtown San Rafael

While visiting Downtown San Rafael, you might make a stop by sights like Mission San Rafael Arcangel and San Rafael Pacifics Albert Park.

Terra Linda

While there might not be top attractions in Terra Linda, you can explore the larger area and discover places like Marin County Civic Center and Marin County Civic Center Farmers' Market.

Southeast San Rafael

If you're looking for some top things to see and do in Southeast San Rafael and surrounding area, you can visit Marin Country Mart and Larkspur Ferry Terminal.

Lucas Valley-Marinwood

Lucas Valley-Marinwood might not have many top sights, but Marin County Civic Center and Marin County Civic Center Farmers' Market are two attractions nearby that you can check out.

Gerstle Park

While Gerstle Park might not have many sights to explore, venturing just a little farther will lead you to top things to see and do like Mission San Rafael Arcangel and San Rafael Pacifics Albert Park.

Top Lincoln Hotel Reviews

Hotel Zoe Fisherman's Wharf

Hotel Zoe Fisherman's Wharf

10/10 Excellent
"."
Evangelos 3-night trip
Posted 14 hours ago
Hotel Zoe Fisherman's Wharf

Frequently asked questions

What is Lincoln like?
Travelers to San Rafael's Lincoln neighborhood will be sure to enjoy a stay in this neighborhood.
What's a favorite hotel to stay in Lincoln?
Based on Expedia customer reviews, Marin Lodge is the highest ranked property in Lincoln. This hotel offers free parking and free WiFi.
How many hotels can I expect to find in Lincoln?
Expedia has 5 Lincoln hotels and other accommodations, and one might make a good home base for venturing out into the greater San Rafael area.
If I need to cancel my hotel reservation in Lincoln, will I receive a refund?
Yes, you'll find most hotel reservations are fully refundable as long as you cancel before the hotel's cancellation deadline, which is often 24 or 48 hours before your check-in date. If your reservation is non-refundable, you may still be able to cancel and get a refund within a 24-hour period of your booking. Add your dates and click on "Search", then filter by "fully refundable" to get the best options available in Lincoln.
What is there to do in this San Rafael neighborhood?
A few places to visit in the area around Lincoln include Marin History Museum, Falkirk Cultural Center, and Mission San Rafael Arcangel. While you're out sightseeing in San Rafael, be sure to visit other sights like Classic Billiards or Rebound Bookstore.