Ayios Thomas Hotels

    calendar shield illustration

    Change your mind

    Book hotels with free cancellation
    deals illustration

    Treat yourself

    Sign in to save 10% or more on thousands of hotels
    bed illustration

    Be picky

    Search almost a million properties worldwide

Check prices for these dates

This weekend
Next weekend

Filter by

Guest rating
Guest rating
Star rating

Top 10 trending Ayios Thomas hotels

Eva Marina Hotel

The price is P4,247
P4,957 total
includes taxes & fees
Jul 25 - Jul 26
Eva Marina Hotel

ELEATERRA HOTEL

8.4 out of 10, Very Good, (7)
"Great hotel convenient to the airport plus nice restaurant. "
The price is P7,844
P9,512 total
includes taxes & fees
Aug 6 - Aug 7
ELEATERRA HOTEL

Matala Dimitris Villa

2.0 star property
7.6 out of 10, Good, (175)
"Very good hotel"
Matala Dimitris Villa

Idi Hotel

2.0 star property
9.0 out of 10, Wonderful, (70)
"The IDI hotel is a great place to stay From breakfast to the restaurant and the accommodations. They are all top notch Thank you"
The price is P4,600
P5,358 total
includes taxes & fees
Jul 26 - Jul 27
Idi Hotel

Traditional Cretan Houses

3.0 star property
8.0 out of 10, Very Good, (63)
"A lovely traditional house in a typical Cretan village away from the tourist hotspots. Our host spoke good English and was very welcoming and helpful. The bakery sells wonderful trays of Baklava which we enjoyed on our spacious roof terrace, a great place for breakfast too. "
The price is P3,336
P3,798 total
includes taxes & fees
Aug 9 - Aug 10
Traditional Cretan Houses

Eliathos Hillside Retreat

9.4 out of 10, Exceptional, (19)
"A small group of modern appartments in a rural location with a great pool and stunning views. 20 min walk from village with good restaurants and shops. Staff are very pleasant and helpful. Going breakfast available. The walk back from the village is steep but a taxi was 5 Euros. If you get the exact Google Maps location it is not difficult to find. "
Eliathos Hillside Retreat

Manili Boutique Suites & Villas

9.4 out of 10, Exceptional, (22)
"Beautiful designed small hotel in a small town close to Knossos."
The price is P13,165
P15,487 total
includes taxes & fees
Aug 8 - Aug 9
Manili Boutique Suites & Villas

Arolithos Traditional Cretan Village

4.0 star property
8.2 out of 10, Very Good, (191)
"Nice heritage village, which we explored during our stay. The view from the restaurant was fantastic and the breakfast delicious. Room had basic facilities."
The price is P3,445
P4,582 total
includes taxes & fees
Aug 20 - Aug 21
Arolithos Traditional Cretan Village

Fodele Beach & Water Park Holiday Resort - All Inclusive

5.0 star property
8.6 out of 10, Excellent, (165)
"We loved our stay at this resort. The staff is incredible. We went with our infant daughter and the staff went out of their way to make our stay to make everything perfect. "
The price is P24,631
P28,977 total
includes taxes & fees
Aug 19 - Aug 20
Fodele Beach & Water Park Holiday Resort - All Inclusive

Apollonia Beach Resort & Spa

5.0 star property
8.2 out of 10, Very Good, (156)
"It had everything you need. We were there in April 2025, in offseason. So some restaurants weren't open. But i would stay again"
The price is P16,645
P19,907 total
includes taxes & fees
Jul 26 - Jul 27
Apollonia Beach Resort & Spa

Castro Hotel

1.0 star property
7.2 out of 10, Good, (60)
"Friendly stuff! "
The price is P7,432
P8,574 total
includes taxes & fees
Aug 1 - Aug 2
Castro Hotel

Ikaros Suites

9.0 out of 10, Wonderful, (18)
"Beautiful and clean rooms Super nice team Cool pool area and pool bar Great restaurant "
Ikaros Suites

Ermis Luxury Suites & Apartments

9.8 out of 10, Exceptional, (16)
"We had a fantastic stay, amazing hosts and hospitality, breakfast was made with love and very tasty. Thankyou and hope to stay again some time soon."
Ermis Luxury Suites & Apartments

Petousis Hotel & Suites

4.0 star property
9.4 out of 10, Exceptional, (102)
"We had a wonderful stay! And the food at their restaurant below, simply exceptional!"
Petousis Hotel & Suites

Yianna Caravel Suites "by Checkin" adults only

4.0 star property
9.4 out of 10, Exceptional, (79)
"Don’t let initial lack of kerb appeal when arriving put you off. This is a fantastic place to stay. Staff who love their jobs, a chef whose menu draws locals to eat in the evenings, super comfy beds in rooms and on the beach which is also on your doorstep. Highly recommend!"
The price is P7,786
P9,512 total
includes taxes & fees
Jul 28 - Jul 29
Yianna Caravel Suites "by Checkin" adults only

Nuovo Crete by Sea

9.6 out of 10, Exceptional, (39)
"Rooms were perfect, also the staff was super friendly and helpfull. "
The price is P6,608
P7,840 total
includes taxes & fees
Jul 30 - Jul 31
Nuovo Crete by Sea

Paralos Lifestyle Beach

4.0 star property
9.6 out of 10, Exceptional, (174)
"Very relaxing hotel. The rooms with direct pool access are amazing and the large pools and beach area offer a great location to unwind. The service was excellent throughout the stay. "
The price is P15,214
P17,947 total
includes taxes & fees
Aug 4 - Aug 5
Paralos Lifestyle Beach

Emi Seaside

9.2 out of 10, Wonderful, (24)
"The staff is amazing Georgios is a very nice person and super available I strongly suggest to stay in this hotel well located with a lot of comforts "
Emi Seaside

Agapi Beach Resort - Premium All Inclusive

4.0 star property
9.2 out of 10, Wonderful, (709)
"Great location, lots of activities and amenities, fantastic food. Would definitely stay again "
The price is P19,346
P22,640 total
includes taxes & fees
Aug 8 - Aug 9
Agapi Beach Resort - Premium All Inclusive

Civitel Creta Beach

4.0 star property
8.6 out of 10, Excellent, (216)
"great property and staff"
The price is P15,993
P18,832 total
includes taxes & fees
Aug 24 - Aug 25
Civitel Creta Beach
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
Save an average of 15% on thousands of hotels when you're signed in

Near an Attraction

Rouvas Gorge

Rouvas Gorge

Explore the great outdoors at Rouvas Gorge, a lovely green space in Gortyna. Discover the mountain views in this culturally rich area.

Learn more about Ayios Thomas

Check out Heraklion Port—just one of the popular sights to explore around Ayios Thomas.

Top Ayios Thomas Hotel Reviews

Frequently asked questions

Where is the best place to stay in Ayios Thomas?

Located 14.4 mi (23.2 km) from the heart of Ayios Thomas, Aquila Atlantis Hotel is a top choice for your stay based on our traveler data. Other good choices for your trip to the area are Hotel Tsagarakis Beach and GDM Megaron Historical Monument Hotel. See all available top hotels, or vacation rentals in Ayios Thomas.

If I need to cancel my hotel reservation in Ayios Thomas, will I receive a refund?

Yes, most room reservations are fully refundable if cancelled prior to the hotel's cancellation deadline, which is usually within 24-48 hours of your check-in date. If your reservation is non-refundable, it may still be possible to cancel it and get a refund within 24 hours of booking. Filter your search by fully refundable to find flexible hotel deals in Ayios Thomas.

Where can I learn more about changing or cancelling my trip to Ayios Thomas?

To find more details about changing or cancelling your trip to Ayios Thomas, head over to our customer service page.

What are some hotels with pools in Ayios Thomas?

Agapi Beach Resort - All Inclusive: Provides 3 outdoor pools, a children's pool, and a private beach. Galaxy Hotel Iraklio and GDM Megaron Historical Monument Hotel are a couple of other choices that offer an onsite pool. View all hotels with pools in Ayios Thomas.

What is the best hotel near Nikos Kazantzakis Airport (HER)?

Sofia Hotel is a popular 3-star hotel featuring free extended parking and a restaurant. It's located a short 0.8 mi (1.2 km) from Nikos Kazantzakis Airport. Other options close to the airport are Pasiphae Hotel and Life Boutique Hotel.

What's it like to stay in Ayios Thomas?

Visitors are sure to enjoy all that Ayios Thomas has to offer. A top sight in the area is Heraklion Port. There are 2873 hotels and other accommodations in the surrounding area. Find out more about Ayios Thomas.

What are the top places to visit in Ayios Thomas?

Heraklion Port is a notable place to visit in the area. You'll also find Gortys and Fourni in the area. Check out what more to see and do in Expedia's Ayios Thomas guide.

What's the weather like in Ayios Thomas?

The hottest months are usually July and August with an average temp of 77°F, while the coldest months are January and February with an average of 55°F. Average annual precipitation for Ayios Thomas is 14 inches.