Hotels near Shelter Island

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Check prices for these dates

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May 10 - May 11
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May 11 - May 12
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May 15 - May 17
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May 22 - May 24

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Our top choices for Shelter Island hotels

Exterior

LYFE INN & SUITES by AGA - San Diego Airport/Point Loma

LYFE INN & SUITES by AGA - San Diego Airport/Point Loma
2.0 star property
1.2 km from Shelter Island
10.0 out of 10, Exceptional, (13 reviews)
"Great new property. I love the room and design. Good clean and great staff"
United States
Jacy
The price is P6,492
P7,320 total
includes taxes & fees
May 25 - May 26
LYFE INN & SUITES by AGA - San Diego Airport/Point Loma
Exterior

Bay Club Hotel & Marina

Bay Club Hotel & Marina
3.5 star property
0.7 km from Shelter Island
9.2 out of 10, Wonderful, (3,589 reviews)
"Great location"
United States
Hui Mei
The price is P9,223
P10,602 total
includes taxes & fees
May 12 - May 13
Bay Club Hotel & Marina
Exterior

Best Western Plus Island Palms Hotel & Marina

Best Western Plus Island Palms Hotel & Marina
3.0 star property
0.4 km from Shelter Island
9.0 out of 10, Wonderful, (1,604 reviews)
"A wonderful location and stay."
United States
Margaret
The price is P9,528
P10,952 total
includes taxes & fees
May 11 - May 12
Best Western Plus Island Palms Hotel & Marina
Property grounds

Humphreys Half Moon Inn

Humphreys Half Moon Inn
3.5 star property
1 km from Shelter Island
9.2 out of 10, Wonderful, (2,968 reviews)
"Loved our stay here. Great area and excellent customer service by all employees."
United States
Kara
The price is P12,063
P15,079 total
includes taxes & fees
May 12 - May 13
Humphreys Half Moon Inn
Exterior

Homewood Suites by Hilton San Diego Airport/Liberty Station

Homewood Suites by Hilton San Diego Airport/Liberty Station
3.0 star property
2.4 km from Shelter Island
9.4 out of 10, Exceptional, (1,501 reviews)
"Outstanding place to stay, friendly staff, incredible breakfast!"
United States
Michael
The price is P11,383
P13,084 total
includes taxes & fees
May 25 - May 26
Homewood Suites by Hilton San Diego Airport/Liberty Station
Courtyard view

Courtyard by Marriott San Diego Airport/Liberty Station

Courtyard by Marriott San Diego Airport/Liberty Station
3.0 star property
2.6 km from Shelter Island
9.2 out of 10, Wonderful, (1,309 reviews)
"Great hotel"
United States
Amy
The price is P10,736
P12,341 total
includes taxes & fees
May 25 - May 26
Courtyard by Marriott San Diego Airport/Liberty Station
Lobby

Hampton Inn & Suites San Diego Airport Liberty Station

Hampton Inn & Suites San Diego Airport Liberty Station
2.5 star property
2.7 km from Shelter Island
9.2 out of 10, Wonderful, (1,721 reviews)
"Staff are very helpful and nearby places to eat are accessible, also near to the airport!"
United States
Mercyditha De
The price is P10,966
P12,605 total
includes taxes & fees
May 31 - Jun 1
Hampton Inn & Suites San Diego Airport Liberty Station
Lobby

TownePlace Suites by Marriott San Diego Airport/Liberty Station

TownePlace Suites by Marriott San Diego Airport/Liberty Station
3.0 star property
2.8 km from Shelter Island
9.0 out of 10, Wonderful, (1,009 reviews)
"Love it great place"
United States
Derek
The price is P10,254
P11,786 total
includes taxes & fees
May 25 - May 26
TownePlace Suites by Marriott San Diego Airport/Liberty Station
Front of property

The Pearl Hotel

The Pearl Hotel
4.0 star property
1.6 km from Shelter Island
8.8 out of 10, Excellent, (1,005 reviews)
"Amazing place to stay! "
United States
Jodi
The price is P10,912
P12,324 total
includes taxes & fees
May 17 - May 18
The Pearl Hotel
Gift shop

Sea Harbor Hotel

Sea Harbor Hotel
2.0 star property
1.4 km from Shelter Island
8.6 out of 10, Excellent, (1,017 reviews)
"location was excellent"
United States
Guillermo
The price is P6,686
P7,539 total
includes taxes & fees
May 11 - May 12
Sea Harbor Hotel
Terrace/patio

Hilton San Diego Airport/Harbor Island

Hilton San Diego Airport/Harbor Island
3.5 star property
2.5 km from Shelter Island
8.8 out of 10, Excellent, (1,206 reviews)
"Great dinner, friendly staff, clean Rooms"
United States
Heather
The price is P9,395
P10,799 total
includes taxes & fees
May 25 - May 26
Hilton San Diego Airport/Harbor Island
Bar (on property)

DoubleTree by Hilton San Diego Bayside

DoubleTree by Hilton San Diego Bayside
3.0 star property
1.8 km from Shelter Island
8.4 out of 10, Very Good, (1,029 reviews)
"Great restaurants"
United States
Gary
The price is P8,898
P10,228 total
includes taxes & fees
May 25 - May 26
DoubleTree by Hilton San Diego Bayside
Desk, blackout drapes, iron/ironing board, cribs/infant beds

Best Western Yacht Harbor Hotel

Best Western Yacht Harbor Hotel
2.5 star property
1.7 km from Shelter Island
8.4 out of 10, Very Good, (1,869 reviews)
"Near some great restaurants and overall a nice hotel"
United States
John
The price is P6,729
P7,721 total
includes taxes & fees
May 11 - May 12
Best Western Yacht Harbor Hotel
Water view

Kona Kai San Diego

Kona Kai San Diego
4.0 star property
0.2 km from Shelter Island
8.2 out of 10, Very Good, (1,003 reviews)
"The beach view is good but everything else is kind of meh. Overall I thought the resort was very overrated for what it is. There are many other better resorts in SD. That being said shelter island is awesome"
United States
Appu
The price is P14,488
P20,291 total
includes taxes & fees
May 11 - May 12
Kona Kai San Diego
View from room

The Monsaraz San Diego, Tapestry Collection by Hilton

The Monsaraz San Diego, Tapestry Collection by Hilton
3.5 star property
1.6 km from Shelter Island
8.4 out of 10, Very Good, (737 reviews)
"Great property and location "
United States
JOSE
The price is P9,166
P10,536 total
includes taxes & fees
May 25 - May 26
The Monsaraz San Diego, Tapestry Collection by Hilton
Exterior

Comfort Inn San Diego Airport At The Harbor

Comfort Inn San Diego Airport At The Harbor
3.5 star property
1.6 km from Shelter Island
7.8 out of 10, Good, (1,494 reviews)
"Very clean, nice facility."
United States
Carmen
The price is P6,853
P7,740 total
includes taxes & fees
May 12 - May 13
Comfort Inn San Diego Airport At The Harbor
Beach/ocean view

Ramada by Wyndham San Diego Airport

Ramada by Wyndham San Diego Airport
3.0 star property
1.6 km from Shelter Island
7.6 out of 10, Good, (1,007 reviews)
"Good place "
United States
Karen
The price is P5,926
P6,800 total
includes taxes & fees
May 13 - May 14
Ramada by Wyndham San Diego Airport
Blackout drapes, iron/ironing board, free WiFi, bed sheets

Hotel Point Loma

Hotel Point Loma
2.0 star property
1.5 km from Shelter Island
7.4 out of 10, Good, (416 reviews)
"Nice stay."
United States
Brian
The price is P4,354
P4,909 total
includes taxes & fees
May 11 - May 12
Hotel Point Loma
Exterior detail

Hotel Aqua Mar

Hotel Aqua Mar
2.0 star property
1.7 km from Shelter Island
6.4 out of 10, (1,003 reviews)
"Very nice location..walk to everything..Easy Airport access.. stayed few times n will again because of Very reasonable rates..Don't plan on sleeping in.. traffic noise permiates everything starting at 0700.."
United States
Stacy
The price is P3,634
P4,097 total
includes taxes & fees
May 13 - May 14
Hotel Aqua Mar
Lobby sitting area

Samesun Ocean Beach - Hostel

Samesun Ocean Beach - Hostel
2.0 star property
Ocean Beach, 4.3 km from Shelter Island
9.6 out of 10, Exceptional, (491 reviews)
"Excellent stay, clean and nice people!"
United States
Christine
The price is P4,019
P4,539 total
includes taxes & fees
May 19 - May 20
Samesun Ocean Beach - Hostel
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
View all properties

Compare popular hotels close to Shelter Island

Property
Property class
Guest rating
Breakfast included
Pool
Spa
Pet-friendly
WiFi included
Exterior
LYFE INN & SUITES by AGA - San Diego Airport/Point Loma
2.0 star property
10.0
Exceptional
13 reviews
View
Exterior
Bay Club Hotel & Marina
3.5 star property
9.2
Wonderful
3,589 reviews
View
Exterior
Best Western Plus Island Palms Hotel & Marina
3.0 star property
9.0
Wonderful
1,604 reviews
View
Property grounds
Humphreys Half Moon Inn
3.5 star property
9.2
Wonderful
2,968 reviews
View
Exterior
Homewood Suites by Hilton San Diego Airport/Liberty Station
3.0 star property
9.4
Exceptional
1,501 reviews
View

Top Shelter Island Hotel Reviews

Wyndham San Diego Bayside

Wyndham San Diego Bayside

8/10 Good
"We loved the view of the bay. It was nice being located in the middle of all the places we wanted to see. We loved seeing the Star of India out our window every morning. Beautiful views."
Andrew 3-night trip
Posted 10 hours ago
Wyndham San Diego Bayside

Hotels near other Shelter Island attractions

Sunset Cliffs Natural Park

You can take time to visit Sunset Cliffs Natural Park during your travels to San Diego. Wander the seaside and beautiful beaches in the area.
See properties

Frequently asked questions

What's the area like around Shelter Island?
Shelter Island is located in a family-friendly area of San Diego known for its beautiful island views and great live music scene. If you're looking for a convenient place to stay, check out the 37 hotels and other accommodations you'll find within a mile.
Where is the best place to stay near Shelter Island?
Adjacent to Shelter Island, Kona Kai San Diego is one of the top choices for your stay based on our traveler data, and this hotel offers a marina and 2 outdoor pools. Other good choices within a short distance include Bay Club Hotel & Marina and Humphreys Half Moon Inn.
How many hotels will I be able to find near Shelter Island?
Expedia has 37 hotels and other accommodations within a mile from Shelter Island.
If I need to cancel the hotel reservation for my stay near Shelter Island, will I receive a refund?
Yes! The majority of hotel room reservations are fully refundable provided that you cancel before the accommodation's cancellation deadline, which often is within 24-48 hours of your arrival date. If you have a reservation that's non-refundable, you may still be able to cancel and be given a refund within 24 hours of your booking. Put your dates in and click on "Search", then use the filter option "fully refundable" to view the top deals on offer near Shelter Island.
What can I see and do near Shelter Island?
You might want to spend some time browsing the exhibits at USS Midway Museum, Maritime Museum of San Diego, or San Diego Air and Space Museum. Explore notable local landmarks like Point Loma Lighthouse, Hotel del Coronado, and Whaley House Museum. You can check out the local talent at Humphreys Concerts by the Bay, The Rady Shell at Jacobs Park, and San Diego Civic Theatre.