Hotels near Shelter Island

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Dec 19 - Dec 20
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Dec 20 - Dec 21
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Dec 19 - Dec 21
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Our top choices for Shelter Island hotels

Exterior
Bay Club Hotel & Marina

Bay Club Hotel & Marina

Bay Club Hotel & Marina
3.5 star property
0.7 km from Shelter Island
9.2 out of 10, Wonderful, (3189)
"Great stay and location!"
United States
Jason
The price is P6,800
P7,816 total
includes taxes & fees
Jan 5 - Jan 6, 2026
Bay Club Hotel & Marina
Property grounds
Humphreys Half Moon Inn

Humphreys Half Moon Inn

Humphreys Half Moon Inn
3.5 star property
1 km from Shelter Island
9.2 out of 10, Wonderful, (2701)
"Great stay"
United States
Michael
The price is P8,727
P11,203 total
includes taxes & fees
Jan 11 - Jan 12, 2026
Humphreys Half Moon Inn
Lobby
Hampton Inn & Suites San Diego Airport Liberty Station

Hampton Inn & Suites San Diego Airport Liberty Station

Hampton Inn & Suites San Diego Airport Liberty Station
2.5 star property
2.7 km from Shelter Island
9.2 out of 10, Wonderful, (1701)
"Excellent place "
Mexico
Rafael
The price is P8,909
P10,240 total
includes taxes & fees
Dec 28 - Dec 29
Hampton Inn & Suites San Diego Airport Liberty Station
Exterior
Best Western Plus Island Palms Hotel & Marina

Best Western Plus Island Palms Hotel & Marina

Best Western Plus Island Palms Hotel & Marina
3.0 star property
0.4 km from Shelter Island
8.8 out of 10, Excellent, (1563)
"Staff was great, easy check in and great location"
United States
Alysa
The price is P6,530
P7,506 total
includes taxes & fees
Jan 5 - Jan 6, 2026
Best Western Plus Island Palms Hotel & Marina
Courtyard view
Courtyard by Marriott San Diego Airport/Liberty Station

Courtyard by Marriott San Diego Airport/Liberty Station

Courtyard by Marriott San Diego Airport/Liberty Station
3.0 star property
2.6 km from Shelter Island
9.2 out of 10, Wonderful, (1366)
"Lovely place to stay!"
United States
Helga
The price is P8,497
P9,767 total
includes taxes & fees
Dec 21 - Dec 22
Courtyard by Marriott San Diego Airport/Liberty Station
Lobby
TownePlace Suites by Marriott San Diego Airport/Liberty Station

TownePlace Suites by Marriott San Diego Airport/Liberty Station

TownePlace Suites by Marriott San Diego Airport/Liberty Station
3.0 star property
2.8 km from Shelter Island
9.0 out of 10, Wonderful, (1003)
"Excellent hotel we stay at from time-to-time because it's close and wakable to airport."
United States
WILLIAM JAMES
The price is P8,932
P10,267 total
includes taxes & fees
Dec 28 - Dec 29
TownePlace Suites by Marriott San Diego Airport/Liberty Station
Front of property
The Pearl Hotel

The Pearl Hotel

The Pearl Hotel
4.0 star property
1.6 km from Shelter Island
8.8 out of 10, Excellent, (1003)
"Lovely spot would stay again "
United States
danixa
The price is P7,614
P8,600 total
includes taxes & fees
Jan 8 - Jan 9, 2026
The Pearl Hotel
Gift shop
Sea Harbor Hotel

Sea Harbor Hotel

Sea Harbor Hotel
2.0 star property
1.4 km from Shelter Island
8.6 out of 10, Excellent, (1005)
"Great stay"
United States
Naomi
Sea Harbor Hotel
Terrace/patio
Hilton San Diego Airport/Harbor Island

Hilton San Diego Airport/Harbor Island

Hilton San Diego Airport/Harbor Island
3.5 star property
2.5 km from Shelter Island
8.8 out of 10, Excellent, (1226)
"The staff was great, the room was clean and the view was amazing."
United States
Lolita
The price is P9,557
P10,986 total
includes taxes & fees
Dec 25 - Dec 26
Hilton San Diego Airport/Harbor Island
Desk, blackout drapes, iron/ironing board, cribs/infant beds
Best Western Yacht Harbor Hotel

Best Western Yacht Harbor Hotel

Best Western Yacht Harbor Hotel
2.5 star property
1.7 km from Shelter Island
8.6 out of 10, Excellent, (1634)
"The breakfast options were good and the staff were very helpful."
Canada
Gail or Rob
The price is P5,852
P6,715 total
includes taxes & fees
Dec 22 - Dec 23
Best Western Yacht Harbor Hotel
Water view
Kona Kai San Diego

Kona Kai San Diego

Kona Kai San Diego
4.0 star property
0.2 km from Shelter Island
8.2 out of 10, Very Good, (1000)
"had a wonderful time for our honey moon here "
United States
Anna
The price is P8,817
P13,649 total
includes taxes & fees
Jan 10 - Jan 11, 2026
Kona Kai San Diego
Bar (on property)
DoubleTree by Hilton San Diego Bayside

DoubleTree by Hilton San Diego Bayside

DoubleTree by Hilton San Diego Bayside
3.0 star property
1.8 km from Shelter Island
8.2 out of 10, Very Good, (1000)
"Clean room and lobby, friendly staff, great menu in on-site cafe, convenient shuttles. "
United States
TobiElizabeth
The price is P7,396
P8,502 total
includes taxes & fees
Jan 1 - Jan 2, 2026
DoubleTree by Hilton San Diego Bayside
Exterior
Comfort Inn San Diego Airport At The Harbor

Comfort Inn San Diego Airport At The Harbor

Comfort Inn San Diego Airport At The Harbor
3.5 star property
1.6 km from Shelter Island
7.8 out of 10, Good, (1188)
"Great location on the bay and close to the airport "
United States
Shawn
The price is P4,967
P5,610 total
includes taxes & fees
Jan 13 - Jan 14, 2026
Comfort Inn San Diego Airport At The Harbor
Lobby
Ramada by Wyndham San Diego Airport

Ramada by Wyndham San Diego Airport

Ramada by Wyndham San Diego Airport
3.0 star property
1.6 km from Shelter Island
7.4 out of 10, Good, (1001)
"Close to airport and the water, free on site parking."
United States
Christina
The price is P5,442
P6,245 total
includes taxes & fees
Dec 22 - Dec 23
Ramada by Wyndham San Diego Airport
Blackout drapes, iron/ironing board, free WiFi, bed sheets
Hotel Point Loma

Hotel Point Loma

Hotel Point Loma
2.0 star property
1.5 km from Shelter Island
7.4 out of 10, Good, (348)
"Great staff and very friendly "
United States
Nalani
Hotel Point Loma
In-room safe, individually decorated, individually furnished, desk
Sunrise Inn San Diego

Sunrise Inn San Diego

Sunrise Inn San Diego
2.0 star property
1.2 km from Shelter Island
5.6 out of 10, (1002)
"For the price and location this hotel is great. My go to when I’m down in San Diego and don’t want to break the bank "
United States
carmina
Sunrise Inn San Diego
Lobby sitting area
Samesun Ocean Beach - Hostel

Samesun Ocean Beach - Hostel

Samesun Ocean Beach - Hostel
2.0 star property
Ocean Beach, 4.3 km from Shelter Island
9.6 out of 10, Exceptional, (372)
"My stay was awesome"
United States
Fred
Samesun Ocean Beach - Hostel
Property grounds
The Inn at Sunset Cliffs

The Inn at Sunset Cliffs

The Inn at Sunset Cliffs
2.5 star property
Ocean Beach, 3.6 km from Shelter Island
9.2 out of 10, Wonderful, (1001)
"Great place beautiful view "
United States
Josue
The price is P11,480
P12,944 total
includes taxes & fees
Dec 21 - Dec 22
The Inn at Sunset Cliffs
Restaurant
Crown City Inn

Crown City Inn

Crown City Inn
2.5 star property
5.4 km from Shelter Island
9.6 out of 10, Exceptional, (652)
"Clean, friendly place at a nice price in a wonderful location."
United States
Scott
Crown City Inn
Exterior
California Dreams Hostel - Ocean Beach

California Dreams Hostel - Ocean Beach

California Dreams Hostel - Ocean Beach
2.0 star property
3.2 km from Shelter Island
8.8 out of 10, Excellent, (202)
"The house is very Nice & relaxing - location's Amazingly quiet, perfect for a relaxing getaway - the volunteer staff are Wonderfully accommodating - make you feel at home 🙂"
United States
Edward
California Dreams Hostel - Ocean Beach
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
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Top Shelter Island Hotel Reviews

Hotels near other Shelter Island attractions

Sunset Cliffs Natural Park, San Diego, California

Sunset Cliffs Natural Park

You can take time to visit Sunset Cliffs Natural Park during your travels to San Diego. Wander the seaside and beautiful beaches in the area.
See properties
Favorite sunset
Photo by Bikini Traveler
Open Photo by Bikini Traveler

Breakers Beach

Why not spend a lazy afternoon at Breakers Beach during your trip to San Diego? Experience the acclaimed theater scene and entertainment choices in this walkable area.
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Frequently asked questions

What's the area like around Shelter Island?
Shelter Island is located in a family-friendly area of San Diego known for its beautiful island views and great live music scene. If you're looking for a convenient place to stay, check out the 44 hotels and other accommodations you'll find within a mile.
Where is the best place to stay near Shelter Island?
Adjacent to Shelter Island, Best Western Plus Island Palms Hotel & Marina is one of the top choices for your stay based on our traveler data, and this hotel offers a marina and 2 outdoor pools. Other good choices within a short distance include Bay Club Hotel & Marina and Kona Kai San Diego.
How many hotels will I be able to find near Shelter Island?
Expedia has 44 hotels and other accommodations within a mile from Shelter Island.
If I need to cancel the hotel reservation for my stay near Shelter Island, will I receive a refund?
Yes! The majority of hotel room reservations are fully refundable provided that you cancel before the accommodation's cancellation deadline, which often is within 24-48 hours of your arrival date. If you have a reservation that's non-refundable, you may still be able to cancel and be given a refund within 24 hours of your booking. Put your dates in and click on "Search", then use the filter option "fully refundable" to view the top deals on offer near Shelter Island.
What can I see and do near Shelter Island?
You might want to spend some time browsing the exhibits at USS Midway Museum, Maritime Museum of San Diego, or San Diego Air and Space Museum. Explore notable local landmarks like Hotel del Coronado, Point Loma Lighthouse, and Star of India. You can check out the local talent at Humphreys Concerts by the Bay, The Rady Shell at Jacobs Park, and San Diego Civic Theatre.