An aerial view of a coastal city with a marina, a large body of water, and a peninsula with buildings.

Mission Bay Hotels near San Diego

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Our top choices for Mission Bay hotels

1. The Dana on Mission Bay

The Dana on Mission Bay
3.5 star property
Mission Bay
9.0 out of 10, Wonderful, (4,492 reviews)
"Wonderful staff, nice amenities, good food, beautiful view!"
United States
Steven
The price is P10,012
P13,339 total
includes taxes & fees
Dec 10 - Dec 11
The Dana on Mission Bay

2. Hyatt Regency Mission Bay Spa and Marina

Hyatt Regency Mission Bay Spa and Marina
4.0 star property
Mission Bay
8.4 out of 10, Very good, (1,642 reviews)
"Beautiful and the breakfast was delicious!"
United States
Megan
The price is P10,947
P15,953 total
includes taxes & fees
Dec 1 - Dec 2
Hyatt Regency Mission Bay Spa and Marina

3. San Diego Mission Bay Resort

San Diego Mission Bay Resort
4.0 star property
Mission Bay
8.6 out of 10, Excellent, (1,675 reviews)
"Amazing rooms and service!!"
United States
Aaroosh
The price is P12,036
P17,203 total
includes taxes & fees
Nov 29 - Nov 30
San Diego Mission Bay Resort

4. Paradise Point Resort & Spa

Paradise Point Resort & Spa
4.0 star property
Mission Bay
8.8 out of 10, Excellent, (2,977 reviews)
"Loved staying at Paradise Point!"
United States
victor
The price is P12,600
P17,831 total
includes taxes & fees
Dec 14 - Dec 15
Paradise Point Resort & Spa

5. Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town

Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town
4.0 star property
2.8 km from Mission Bay
9.2 out of 10, Wonderful, (1,489 reviews)
"The breakfast was amazing!"
United States
David
The price is P8,607
P9,893 total
includes taxes & fees
Nov 19 - Nov 20
Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town

6. Holiday Inn Express San Diego - SeaWorld Area by IHG

Holiday Inn Express San Diego - SeaWorld Area by IHG
2.5 star property
2.3 km from Mission Bay
8.8 out of 10, Excellent, (1,007 reviews)
"Would stay again, my kids enjoyed the room . Hotel it close to lots of restaurants and sea worlds , minutes away from mission beach ."
United States
Jose
The price is P7,527
P8,652 total
includes taxes & fees
Dec 14 - Dec 15
Holiday Inn Express San Diego - SeaWorld Area by IHG

7. Homewood Suites by Hilton San Diego Hotel Circle/SeaWorld Area

Homewood Suites by Hilton San Diego Hotel Circle/SeaWorld Area
3.0 star property
4.2 km from Mission Bay
8.8 out of 10, Excellent, (1,754 reviews)
"Clean room, very friendly staff, great breakfast."
United States
Edith
The price is P8,979
P10,321 total
includes taxes & fees
Dec 1 - Dec 2
Homewood Suites by Hilton San Diego Hotel Circle/SeaWorld Area

8. Best Western Inn & Suites San Diego – Zoo/SeaWorld Area

Best Western Inn & Suites San Diego – Zoo/SeaWorld Area
2.5 star property
3.6 km from Mission Bay
8.0 out of 10, Very good, (3,106 reviews)
"Clean and spacious room, good breakfast, nice staff."
United States
Antonia
The price is P8,089
P9,298 total
includes taxes & fees
Nov 17 - Nov 18
Best Western Inn & Suites San Diego – Zoo/SeaWorld Area

9. Crowne Plaza San Diego - Mission Valley by IHG

Crowne Plaza San Diego - Mission Valley by IHG
3.5 star property
4 km from Mission Bay
8.4 out of 10, Very good, (1,505 reviews)
"Had a good stay"
United States
Yesenia
The price is P6,958
P8,022 total
includes taxes & fees
Nov 16 - Nov 17
Crowne Plaza San Diego - Mission Valley by IHG

10. GreenTree Inn San Diego Mission Bay

GreenTree Inn San Diego Mission Bay
2.5 star property
Pacific Beach, 3 km from Mission Bay
8.0 out of 10, Very good, (2,457 reviews)
"Great stay!"
United States
Arman
The price is P6,610
P7,597 total
includes taxes & fees
Nov 18 - Nov 19
GreenTree Inn San Diego Mission Bay

11. Bahia Resort Hotel

Bahia Resort Hotel
3.5 star property
Central Mission Beach, 2.3 km from Mission Bay
8.8 out of 10, Excellent, (2,528 reviews)
"Great getaway place near the pier"
United States
Hector
The price is P8,101
P12,850 total
includes taxes & fees
Dec 6 - Dec 7
Bahia Resort Hotel

12. Hampton Inn San Diego/Mission Valley

Hampton Inn San Diego/Mission Valley
2.5 star property
4.3 km from Mission Bay
8.6 out of 10, Excellent, (1,824 reviews)
"Great location, quiet, great breakfast , would stay there again."
United States
Blake Douglas
The price is P8,066
P9,271 total
includes taxes & fees
Nov 19 - Nov 20
Hampton Inn San Diego/Mission Valley

13. Wyndham Garden San Diego Near SeaWorld

Wyndham Garden San Diego Near SeaWorld
3.0 star property
2.6 km from Mission Bay
7.4 out of 10, Good, (4,179 reviews)
"great stay"
United States
Sarah
The price is P6,067
P6,974 total
includes taxes & fees
Nov 19 - Nov 20
Wyndham Garden San Diego Near SeaWorld

14. Comfort Inn San Diego - SeaWorld Area

Comfort Inn San Diego - SeaWorld Area
3.5 star property
2.8 km from Mission Bay
8.6 out of 10, Excellent, (4,318 reviews)
"Staff was very friendly, rooms were gorgeous and clean, and breakfast was a hit! Definitely staying here again in the next San Diego trip!"
United States
Luis
The price is P6,452
P7,416 total
includes taxes & fees
Dec 6 - Dec 7
Comfort Inn San Diego - SeaWorld Area

15. Old Town Inn

Old Town Inn
2.5 star property
3.5 km from Mission Bay
9.0 out of 10, Wonderful, (2,053 reviews)
"Wonderful place to stay!!"
Canada
Anne
The price is P8,879
P10,189 total
includes taxes & fees
Dec 14 - Dec 15
Old Town Inn

16. Holiday Inn Express San Diego Airport - Old Town by IHG

Holiday Inn Express San Diego Airport - Old Town by IHG
2.5 star property
4.8 km from Mission Bay
9.2 out of 10, Wonderful, (1,097 reviews)
"Great family hotel. Simple and clean yummy breakfast inexpensive and perfect for our short stay in sd"
United States
Alejandra
The price is P8,603
P9,888 total
includes taxes & fees
Nov 17 - Nov 18
Holiday Inn Express San Diego Airport - Old Town by IHG

17. Homewood Suites by Hilton San Diego Airport/Liberty Station

Homewood Suites by Hilton San Diego Airport/Liberty Station
3.0 star property
5.3 km from Mission Bay
9.4 out of 10, Exceptional, (1,708 reviews)
"Very pleasant stay."
United States
Alicia
The price is P11,359
P13,057 total
includes taxes & fees
Nov 24 - Nov 25
Homewood Suites by Hilton San Diego Airport/Liberty Station

18. Hampton Inn & Suites San Diego Airport Liberty Station

Hampton Inn & Suites San Diego Airport Liberty Station
2.5 star property
5.3 km from Mission Bay
9.2 out of 10, Wonderful, (1,740 reviews)
"Very clean property and helpful, friendly staff."
United States
Dean
The price is P9,953
P11,440 total
includes taxes & fees
Nov 22 - Nov 23
Hampton Inn & Suites San Diego Airport Liberty Station

19. Best Western Plus Hacienda Hotel Old Town

Best Western Plus Hacienda Hotel Old Town
3.0 star property
Old Town San Diego, 3.7 km from Mission Bay
8.4 out of 10, Very good, (2,202 reviews)
"Great Place!"
United States
Erick
The price is P8,198
P9,423 total
includes taxes & fees
Nov 17 - Nov 18
Best Western Plus Hacienda Hotel Old Town

20. The Alcala Hotel Mission Valley/Seaworld

The Alcala Hotel Mission Valley/Seaworld
2.5 star property
3.6 km from Mission Bay
8.0 out of 10, Very good, (996 reviews)
"Great stay !"
United States
David
The price is P4,536
P5,214 total
includes taxes & fees
Dec 14 - Dec 15
The Alcala Hotel Mission Valley/Seaworld
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Compare popular hotels in Mission Bay

Property
Property class
Guest rating
Breakfast included
Pool
Spa
Pet-friendly
WiFi included
A pathway flanked by lush tropical plants and a stone statue.
The Dana on Mission Bay
3.5 star property
9.0
Wonderful
4,492 reviews
View
A modern building with a curved roof, surrounded by lush tropical vegetation.
Paradise Point Resort & Spa
4.0 star property
8.8
Excellent
2,977 reviews
View
A spacious living area with a high ceiling, large windows, a dining table, and a sofa.
San Diego Mission Bay Resort
4.0 star property
8.6
Excellent
1,675 reviews
View
A resort pool with a lazy river, palm trees, and a view of the ocean.
Hyatt Regency Mission Bay Spa and Marina
4.0 star property
8.4
Very good
1,642 reviews
View
A beach view with a palm tree, a covered area with people, and a building with a sloped roof.
The Beach Cottages
2.5 star property
9.4
Exceptional
1,000 reviews
View

Where to stay in Mission Bay

Find the best Mission Bay areas and neighborhoods for the activities you enjoy most.

Downtown San Diego

Petco Park and Port of San Diego are a few top attractions in Downtown San Diego. Hop around the city on the metro at Civic Center Station or Civic Center Station and check out the area's fantastic nightlife, fascinating museums, and beautiful waterfront views.

Pacific Beach

Relax in beachside cafés in the morning, surf clean breaks in the afternoon and dance with a youthful club crowd at night at this coastal San Diego strip.

Gaslamp Quarter

The historic heart of San Diego has a fascinating history, and today is a thriving hub for food, retail and entertainment.

Mission Beach

If you're spending some time in Mission Beach, Mission Bay and Mission Beach are top sights worth seeing.

Point Loma

The stunning beaches and island views are just a few highlights of Point Loma. Make a stop by Marine Corps Recruit Depot or Shelter Island while you're exploring the area.

Top Mission Bay Hotel Reviews

Frequently asked questions

What is Mission Bay like?
You'll be sure to have fun visiting San Diego's Mission Bay neighborhood. Looking for sights you might find in a travel guide about Mission Bay? Consider a visit to Mission Bay while you're in the neighborhood.
What's a favorite hotel to stay in Mission Bay?
Based on our traveler data, Paradise Point Resort & Spa is one of the top choices for your stay in Mission Bay. This resort is a short 1-minute walk from Mission Bay, and it offers a marina and 5 outdoor pools. Other good options for your stay in the neighborhood include The Dana on Mission Bay and San Diego Mission Bay Resort.
How many hotels should I expect to find in Mission Bay?
If you're searching for places to stay in San Diego, Expedia has something to meet your needs with 37 Mission Bay hotels and other accommodations to choose from.
If I need to cancel my hotel reservation in Mission Bay, will I receive a refund?
Yes, you'll find most room reservations are refundable provided that you cancel prior to the accommodation's cancellation deadline, which is usually within 24-48 hours of your check-in date. If your reservation is non-refundable, you might be able to cancel it and be given a refund within a 24-hour period of your booking. Add your dates and click on "Search", then use the filter option "fully refundable" to view the best options available in Mission Bay.
What is there to do around this San Diego neighborhood?
Enjoy a stroll along the shore at Ski Beach, Mission and Pacific Beaches, and Crown Point Shores while you're in Mission Bay. You could also plan a visit to Mission Bay or North Cove Beach while you're in the neighborhood. Don't miss favorite places to visit in the surrounding area, such as Mission Beach, Marine Corps Recruit Depot, and Hotel Circle. When you're sightseeing in San Diego, The Dana On Mission Bay, BW Premier Collection and Marina Village Conference Center are also worth a stop.