A lakeside lodge with a wooden pier, surrounded by lush greenery and a forested backdrop.

San Juan Island 3 Stars Hotels

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Check availability on San Juan Island 3 Star Hotels

Tonight
Oct 12 - Oct 13
Tomorrow
Oct 13 - Oct 14
This weekend
Oct 16 - Oct 18
Next weekend
Oct 23 - Oct 25

Our top choices for San Juan Island 3-star hotels

A two-story house with a red roof and white exterior, featuring a front porch with red chairs and a small tree.
A bar area with wooden stools, a bar counter, and shelves stocked with bottles.
A spacious living area with a fireplace, patterned furniture, and large windows.
A house with a red roof, surrounded by lush greenery and mountains in the background.

1. Anacortes Ship Harbor Inn

Anacortes Ship Harbor Inn
Anacortes
United States
Traci
P5,597
P6,207 total
includes taxes & fees
Nov 1 - Nov 2
Anacortes Ship Harbor Inn
A wooden pier leading to a building with large windows and a flagpole.
A wooden interior with a bench, tables, and a staircase leading to the hotel office.
A wooden pier leading to a dock with boats, a grocer's shop, and a forested hillside in the background.
A restaurant with stone walls, wooden tables, and chairs. There are large windows allowing natural light.

2. Lopez Islander Resort

Lopez Islander Resort
Lopez Island
United States
Carolyn
P11,245
P12,409 total
includes taxes & fees
Oct 13 - Oct 14
Lopez Islander Resort
A living room with a sofa, armchairs, a coffee table, and a fireplace.
A landscaped garden with neatly trimmed hedges, a white picket fence, and a wooden signboard.
A hotel lobby with a reception desk, seating area, and a view of the adjacent room.
A waterfront promenade with benches, a gazebo, and a large white boat docked at a pier.

3. Earthbox Inn & Spa

Earthbox Inn & Spa
Friday Harbor
United States
Ann
P13,821
P15,293 total
includes taxes & fees
Nov 1 - Nov 2
Earthbox Inn & Spa
A modern bathroom with a walk-in shower, a white shower curtain, a large mirror, and a vanity with toiletries.
A waterfront hotel with multiple docked boats, a pier, and a view of the surrounding forested area.
A serene lakeside setting with string lights, wicker chairs, and a fire pit area.
A marina with boats docked in a structured layout, surrounded by water and a distant cityscape.

4. Roche Harbor Resort

Roche Harbor Resort
Friday Harbor
United States
Nicco
P12,212
P14,150 total
includes taxes & fees
Nov 1 - Nov 2
Roche Harbor Resort
A waterfront property with multiple buildings, including a large house with a prominent roof and a smaller structure with a chimney.
A hotel room with a bed, a TV mounted on the wall, a desk with a chair, and a large window offering a view of the sea and mountains.
A modern building with a stone foundation and large windows, surrounded by a white fence and greenery.
A view from a porch with a white railing, overlooking a body of water, mountains, and a grassy area with trees and a fence.

5. Outlook Inn

Outlook Inn
Eastsound
United States
Corey
P19,505
P22,466 total
includes taxes & fees
Nov 1 - Nov 2
Outlook Inn
Two people relaxing by a fire pit with a view of a harbor and a large ship.
A coastal town at dusk with a marina, boats, and a large cruise ship docked.
A couple in white bathrobes sitting on a bed with a textured headboard, two wall-mounted lamps, and a decorative wall piece.
A bar area with a large TV screen displaying a landscape, a bookshelf with books and bottles, and leather chairs.

6. Friday Harbor House

Friday Harbor House
Friday Harbor
United States
Randy
P19,167
P21,208 total
includes taxes & fees
Nov 1 - Nov 2
Friday Harbor House
A covered patio with a fire pit, outdoor furniture, and a view of a house in the background.
A dining room with a large wooden table surrounded by chairs, a chandelier, and large windows with blinds.
A hotel entrance with a sign, steps, and a flag.
A two-story house with a front porch, a covered walkway, and a well-maintained lawn.

7. Nantucket Inn

Nantucket Inn
Anacortes
United States
Elizabth
P11,873
P13,167 total
includes taxes & fees
Oct 15 - Oct 16
Nantucket Inn
An aerial view of a coastal marina with boats docked, surrounded by lush greenery and residential areas.
A wooden porch with two cushioned chairs, a hanging flower pot, and a sign thanking the carpenter family.
A cozy cabin interior with a kitchen, dining area, and a fireplace.
A cozy room with a fireplace, a television, a dining area, and a sofa with a view of greenery.

8. Deer Harbor Inn

Deer Harbor Inn
Deer Harbor
United States
Nemo
P15,002
P16,555 total
includes taxes & fees
Oct 13 - Oct 14
Deer Harbor Inn
A wooden deck with a view of a lake and mountains.
A living room with a sofa, a coffee table, a dining table, and a chandelier.
A dining area with a round table, four chairs, and a potted plant.
A cozy living room with a dining table, chairs, a patterned armchair, and a wooden coffee table.

9. Landmark Inn on Orcas Island

Landmark Inn on Orcas Island
Eastsound
United States
Randall
Landmark Inn on Orcas Island
A rustic wooden sign with the text "Inn To The Woods" and a moon and stars design.
A four-poster canopy bed with a brown bedspread, multiple decorative pillows, and a floral-patterned bench at the foot of the bed.
A wooden deck with wicker furniture, a table with a glass top, and potted plants.
A wooden sign with "IN" written on it, a potted plant, and a pathway leading to a building.

10. Inn to the Woods B&B

Inn to the Woods B&B
Friday Harbor
United States
Terri
Inn to the Woods B&B
A wooden deck with a table and grill, overlooking a lake with a distant bridge.
A wooden deck with two green umbrellas, a wooden pier extending into calm water, and a view of distant land.
A wooden cabin interior with a dining table, chairs, a sofa, and a ceiling fan.
A wooden cabin with a dining area and a patio overlooking a rocky shoreline.

11. West Beach Resort

West Beach Resort
Eastsound
United States
lorrie
P11,685
P12,894 total
includes taxes & fees
Nov 9 - Nov 10
West Beach Resort
A serene outdoor seating area with a table and chairs, surrounded by lush greenery and a tree.
A two-story building with a red door, surrounded by a garden with various plants and flowers.
A spacious entryway with a wooden staircase, a patterned rug, and potted plants.
A grassy area with a pond, trees, and a red chair.

12. Trumpeter Inn

Trumpeter Inn
Friday Harbor
United States
Nina
P13,868
P15,303 total
includes taxes & fees
Oct 13 - Oct 14
Trumpeter Inn
A two-story building with a covered porch, surrounded by a variety of flowering plants.
A room with a bed, a TV, a table with chairs, a rug, and a balcony with chairs.
A living room with a grand piano, a fireplace, a sofa, and a chair.
A dining room with a large wooden table surrounded by chairs, a patterned rug, and a cabinet with a mirror.

13. Friday Harbor Grand B&B

Friday Harbor Grand B&B
Friday Harbor
United States
Andrew
P16,114
P17,830 total
includes taxes & fees
Oct 13 - Oct 14
Friday Harbor Grand B&B
A wooden deck with a railing, potted plants, and hanging flower baskets.
A dining area with a wooden table and chairs, a patterned rug, and a painting on the wall.
A cozy living room with a fireplace, a red velvet chair, and a stone wall.
A house with a red exterior, a front porch, and a staircase leading to the entrance.

14. Kangaroo House B&B on Orcas Island

Kangaroo House B&B on Orcas Island
Eastsound
United States
Ashlee
P14,115
P15,576 total
includes taxes & fees
Oct 20 - Oct 21
Kangaroo House B&B on Orcas Island
A wooden pier extending over calm water with a clear sky above.
A wooden deck with a glass door leading to a bedroom, a glass table, and a view of a lake with boats.
A neatly arranged bedroom with a large bed, bedside tables, a bedside lamp, a window with curtains, and a small table with cups.
A bar area with wooden shelves, stools, and a counter.

15. Kingfish at West Sound

Kingfish at West Sound
Eastsound
United States
Yoav
Kingfish at West Sound
A covered outdoor area with wicker furniture and umbrellas, a wooden deck, and a house with large windows.
A bedroom with a bed, wooden dresser, television, and a mirror.
A living room with a sofa, coffee table, and a red door in the background.
A modern kitchen with wooden cabinets, a built-in microwave, and a bar area with stools.

16. Oak Harbor Hideaway - 5 Mi to Deception Pass!

Oak Harbor Hideaway - 5 Mi to Deception Pass!
Oak Harbor
Oak Harbor Hideaway - 5 Mi to Deception Pass!
A spacious deck with a sliding glass door leading to a patio area, a barbecue grill, and a dining table set with plates and placemats.
A modern living room with a blue sofa, a wooden dining table with chairs, and a kitchen area with a white countertop and appliances.
A modern living room with a blue sofa, wooden flooring, and a ceiling fan.
A kitchen with a wooden countertop, a sink, and a window. There is a dining table with chairs and a window with a view of trees.

17. Swan Lake Cottage by Avantstay Views + Firepit

Swan Lake Cottage by Avantstay Views + Firepit
Oak Harbor
United States
Vienna
Swan Lake Cottage by Avantstay Views + Firepit
A room with a large window overlooking a grassy area and a body of water. There is a round table with two chairs and a potted plant on it.
A garden with a variety of plants and flowers, a gazebo, and a house with a butterfly sculpture in the foreground.
A two-story house with large windows, a covered porch, and lush greenery.
Outdoor wooden chairs arranged on a grassy area with a view of a lake and trees in the background.

18. The Bluff on Whidbey B&B

The Bluff on Whidbey B&B
Oak Harbor
United States
Larry
The Bluff on Whidbey B&B
A log cabin with a porch, two chairs, a grill, and a stone fire pit.
A cozy cabin interior with a wooden interior, a dining area with a table and chairs, a bed, and a fireplace.
A log cabin interior with a leather sofa, a fireplace, and a view of the outdoors.
A wooden cabin interior with a dining table, a sofa, a ladder, and a view of greenery outside.

19. Penn Cove Overlook by Avantstay Cabin w/ Views

Penn Cove Overlook by Avantstay Cabin w/ Views
Oak Harbor
United States
Kathlynn Leilani
Penn Cove Overlook by Avantstay Cabin w/ Views
A bedroom with a large bed, a desk, and a view of the sea.
A residential area with houses, a grassy lawn, and a paved driveway.
A coastal view with a wooden railing, ocean waves, and distant mountains.
A spacious living room with a wooden ceiling, a large flat-screen TV, a sofa set, a coffee table, and a view of a mountain landscape through large windows.

20. @ Marbella Lane - Seas the Bay Sanctuary

@ Marbella Lane - Seas the Bay Sanctuary
Oak Harbor
United States
Luke
P15,580
P39,329 total
includes taxes & fees
Oct 13 - Oct 14
@ Marbella Lane - Seas the Bay Sanctuary
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Explore similar 4-star hotels

Many 4-star hotels have the same amenities as 3-star hotels. See all 4-star hotels in San Juan Island.
Tucker House Inn

Tucker House Inn

275 C Street Friday Harbor WA
P9,053
P10,017 total
Nov 2 - Nov 3
includes taxes & fees
9.2/10 Wonderful! (304 reviews)
Tucker House Inn
Otters Pond Bed & Breakfast

Otters Pond Bed & Breakfast

100 Tomihi Dr Eastsound WA
Get rates
10/10 Exceptional! (73 reviews)
Otters Pond Bed & Breakfast
Majestic Inn & Spa

Majestic Inn & Spa

419 Commercial Avenue Anacortes WA
Get ratesMajestic Inn & Spa
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Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Learn more about San Juan Island

San Juan Island entices visitors with its quaint harbor towns, forest trails and the chance to see a range of wildlife, including endangered orcas.

See all hotels in San Juan Island
A waterfront view of Hotel de Haro with a stone wall and a reflection in the water.

Top San Juan Island Hotel Reviews

Roche Harbor Resort

Roche Harbor Resort

10/10 Excellent
"That was nothing that we did NOT like for an older & Historic property actually I was very impressed and I am sure we will be back"
jorge 1-night trip
Posted 6 hours ago
Roche Harbor Resort

Frequently asked questions

How much does it cost to stay in a 3-star hotel in San Juan Island?
To lock in an economical 3-star hotel in San Juan Island, use our convenient filter tool. Set your budget limit, choose your desired amenities and much more. You also have the ability to sort your search results so the most affordable options appear on top.
  • Search for the lowest price per night right now from P10,017
What is the difference between a 4-star and 3-star hotel in San Juan Island?
Relaxation is easy to find in 3-star hotels in San Juan Island. Alongside comfortable surroundings, these more cost-effective lodgings come with plenty of welcome amenities like free WiFi, in-room coffee maker and a gym. A 4-star hotel offers a more refined ambience with upscale features such as an on-site spa, outdoor or indoor swimming pool and spacious rooms. No matter your preferred hotel type or what you want to spend, we have the perfect match for you.
What is the difference between a 3-star hotel and a motel in San Juan Island?
Motels generally offer more affordable rates than hotels, which makes them perfect if you're exploring around San Juan Island on a shoestring. A popular option for overnight trips, these roadside accommodations come with simply furnished rooms, limited services and on-site parking. Choose a 3-star hotel and you can expect to pay extra for additional space, privacy and amenities. Travelers can take advantage of things like a lobby, free WiFi and meeting rooms at this style of property.

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